The detailed information of tRNA gene sequence


Sequence ID>SRA1000850
Genome IDSRR001047.277976
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 29
End posion on genome 104
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tagagtcaaa
tRNA gene sequence 
GCTGGTTTAGCTCAGTTGGTAGAGCAACTGCCTTGTAAGCAGTAGGTCGTCAGTTCGAAT
CCGACAACCAGCACCA
Downstream region at tRNA end position 
atcnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000850	Thr	TGT
                   a      ACCA atcnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     C A G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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