The detailed information of tRNA gene sequence


Sequence ID>SRA1000854
Genome IDSRR001047.296367
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 87
End posion on genome 13
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gccctcttat
tRNA gene sequence 
GGGGGATTAGTTCAGTGGTAGAACATCGGTTTTACACGCCGAGTGTGGGGAGTTCGATTC
TCTCATCCCCTACCA
Downstream region at tRNA end position 
attttatgta
Secondary structure (Cloverleaf model)
>SRA1000854	Val	TAC
                   t      ACCA attttatgta
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     C T C T C     A
        G A        A      | + | | |     G
      T     C T T G       G G G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     GTGTG
                    T - A
                    C - G
                    G - C
                    G - C
                    T + G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK