The detailed information of tRNA gene sequence


Sequence ID>SRA1000861
Genome IDSRR001047.311729
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 91
End posion on genome 17
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
caaataaatg
tRNA gene sequence 
GTGACTATAGTGTAACGGTTAACACGCTAGATTGTGGTTCTGGAAATGGGAGTTCGATTC
TCCTTAGTCACCCTA
Downstream region at tRNA end position 
gtatatggtg
Secondary structure (Cloverleaf model)
>SRA1000861	His	GTG
                   g      CCTA gtatatggtg
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          T T
                    T     T C C T C     A
      C A A        A      + | | | |     G
    G       T G T G       G G G A G     C
    G       | | | |                 T T
    T       A C A C
      T A          G     AAAT
                    C - G
                    T + G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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