The detailed information of tRNA gene sequence


Sequence ID>SRA1000866
Genome IDSRR001048.53666
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 18
End posion on genome 93
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tgcttgatgt
tRNA gene sequence 
TCCCCGATAGCTCAGTCGGTAGAGCAGTAGACTGTTAATCTATTGGTCGCTGGTTCAAGT
CCAGCTCGGGGAGCCA
Downstream region at tRNA end position 
cttctcnnnn
Secondary structure (Cloverleaf model)
>SRA1000866	Asn	GTT
                   t      GCCA cttctcnnnn
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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