The detailed information of tRNA gene sequence


Sequence ID>SRA1000868
Genome IDSRR001048.87419
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 75
End posion on genome -1
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
caaaccgcaC
tRNA gene sequence 
GTCTCCGTAGCTCAGCAGGATAGAGCAACAGATTCCTAATCTGTAGGTCGCGCGTTCGAA
TCGCGCCGGGGACGNNn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000868	Arg	CCT
                   C      GNNn nnnnnnnnnn
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C G C     A
      C G A        A      | | | | |     G
    A       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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