The detailed information of tRNA gene sequence


Sequence ID>SRA1000874
Genome IDSRR001048.159846
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 82
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatagtacaa
tRNA gene sequence 
GGCTCTGTAGCTCAGTGGTTAGAGCGGAGGATTCATAAGCCTTAGGTCGTAGGTTCAAAT
CCCACCAGAGCCAtct
Downstream region at tRNA end position 
attcctnnnn
Secondary structure (Cloverleaf model)
>SRA1000874	Met	CAT
                   a      Atct attcctnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | |   | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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