The detailed information of tRNA gene sequence


Sequence ID>SRA1000878
Genome IDSRR001048.226923
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 1
End posion on genome 87
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTCAAGGTAACGCATTGCTAATGCGTCGTATAAAATATTATA
CCGAGGGTTCGAATCCCTTCCCTTCCAaat
Downstream region at tRNA end position 
tagaatttaa
Secondary structure (Cloverleaf model)
>SRA1000878	Ser	GCT
                   n      Aaat tagaatttaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      T C A        A     CGTATAAAATATTATACC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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