The detailed information of tRNA gene sequence


Sequence ID>SRA1000884
Genome IDSRR001048.284327
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 103
End posion on genome 29
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnngA
tRNA gene sequence 
GGCTAGATAACATAATGGCAATGTATTGGATTGCAAATCCTGTAATGGCGGTTCGATTCC
GCCTCTAGCCTTCA
Downstream region at tRNA end position 
acaagccttc
Secondary structure (Cloverleaf model)
>SRA1000884	Cys	GCA
                   A      TTCA acaagccttc
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     A - T          T T
                    T     C C G C C     A
        A A        A      | | | | |     G
      T     T A C A       G G C G G     C
      G     | | | |                 T T
      G     A T G T
        C A        A     TAAT
                    T + G
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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