The detailed information of tRNA gene sequence


Sequence ID>SRA1000885
Genome IDSRR001048.294076
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction from water of Palmyra (SRP000140)
Species
Start position on genome 38
End posion on genome 110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctagaggaaa
tRNA gene sequence 
TCCCCTATGGTCTAGTGGCTAGGATTTCTGACTCTCACTCAGGAGGCCGGGGTTCGATTC
CCCGTGGGGGAACtt
Downstream region at tRNA end position 
tttttcgaac
Secondary structure (Cloverleaf model)
>SRA1000885	Glu	CTC
                   a      ACtt tttttcgaac
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      T A          T     AGGC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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