The detailed information of tRNA gene sequence


Sequence ID>SRA1000897
Genome IDSRR001049.23359
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttatattt
tRNA gene sequence 
GGACCTATAGCTCAATGGTCAGAGCATCCGGCTCATAACCGGCAGGTTCTTGGTTCGAGT
CCAAGTGGGTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000897	Met	CAT
                   t      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G A A C C     A
      T A A        A      | | | | |     G
    G       C T C G       C T T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     AGGTT
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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