The detailed information of tRNA gene sequence


Sequence ID>SRA1000900
Genome IDSRR001049.47385
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 120
End posion on genome 46
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCTCATAGTTAAGAGGATATAACCTCCGCCTTCTAAGCGGATGTCCCTGGTTCGATTC
CAGGTGAGCCTGCCT
Downstream region at tRNA end position 
tgcggaatta
Secondary structure (Cloverleaf model)
>SRA1000900	Arg	TCT
                   n      GCCT tgcggaatta
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     G G A C C     A
      A G A        A      | | | | |     G
    G       A T T G       C C T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          C     TGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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