The detailed information of tRNA gene sequence


Sequence ID>SRA1000902
Genome IDSRR001049.66880
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 106
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ngtatatatt
tRNA gene sequence 
GGACCTCTAGCTCAGTTGGTTAGAGCACACCGCTCATAACGGTTAGGTCCTCGGTTCGAG
TCCGAGGGGGTCCACCA
Downstream region at tRNA end position 
aacacggagt
Secondary structure (Cloverleaf model)
>SRA1000902	Met	CAT
                   t      ACCA aacacggagt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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