The detailed information of tRNA gene sequence


Sequence ID>SRA1000906
Genome IDSRR001049.78018
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 52
End posion on genome 127
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaacaaaaT
tRNA gene sequence 
GGGGTCGTAGTTTAATTTGGAAGAACAACTCGTTTGCGACGAGTAGGCTGGGAGTTCAAA
TCTCCCCGACTCCATac
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000906	Ala	TGC
                   T      ATac nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C C C T C     A
      T A A        A      | | | | |     A
    T       T T T G       G G G A G     C
    T       + | | |                 T T
    G       G A A C
      G A A        A     AGGCT
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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