The detailed information of tRNA gene sequence


Sequence ID>SRA1000913
Genome IDSRR001049.127086
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 6
End posion on genome 81
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnntctat
tRNA gene sequence 
GATCCCATAGCTCAGATGGTAGAGCAAATCACTTTTAATGATTGGGTCGTAGGTTCGAAT
CCTACTGGGATCGCCA
Downstream region at tRNA end position 
agtgaaacca
Secondary structure (Cloverleaf model)
>SRA1000913	Lys	TTT
                   t      GCCA agtgaaacca
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T C C     A
      A G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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