The detailed information of tRNA gene sequence


Sequence ID>SRA1000916
Genome IDSRR001049.134012
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 14
End posion on genome 88
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atattataat
tRNA gene sequence 
AGGGACATAGTTAAACGGATATAACAGTGGCCTTCTAAGCCTCTATTGTGGGTTCGATTC
CCGCTGTCCCTACCA
Downstream region at tRNA end position 
taatcagcca
Secondary structure (Cloverleaf model)
>SRA1000916	Arg	TCT
                   t      ACCA taatcagcca
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     C G C C C     A
      C A A        A      | + | | |     G
    G       A T T G       G T G G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     TATT
                    G - C
                    T   T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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