The detailed information of tRNA gene sequence


Sequence ID>SRA1000918
Genome IDSRR001049.139262
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 109
End posion on genome 38
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
GGTAGATTAGCTCAGCGGTAGAGCTATTCGTTTACACCGAATCGGTCACTGGTTCGATCC
CAGTATCTCCCAttt
Downstream region at tRNA end position 
tcataaggtt
Secondary structure (Cloverleaf model)
>SRA1000918	Val	TAC
                   g      Attt tcataaggtt
                     G - C
                     G - C
                     T   C
                     A - T
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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