The detailed information of tRNA gene sequence


Sequence ID>SRA1000921
Genome IDSRR001049.144272
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 90
End posion on genome 15
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggccagccaa
tRNA gene sequence 
GGTCCTTTGGTGTAGCGGTTAACACGTCCGCCTGTCACGCGGAAGATCACGGGTTCGATT
CCCGTAAGGACCGCCA
Downstream region at tRNA end position 
taaggtaatg
Secondary structure (Cloverleaf model)
>SRA1000921	Asp	GTC
                   a      GCCA taaggtaatg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          T T
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       T G T G       A C G G G     C
    G       | | | |                 T T
    T       A C A C
      T A          G     AGATC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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