The detailed information of tRNA gene sequence


Sequence ID>SRA1000922
Genome IDSRR001049.150494
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 98
End posion on genome 25
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ngaattcaaT
tRNA gene sequence 
GGGTGTGTGGTGTAATGGATAGCATCTTGGCCTTCTAAGCCGAGGATAGGGGTTCGATTC
CTCTCACGCCCGTtt
Downstream region at tRNA end position 
aattttcaaa
Secondary structure (Cloverleaf model)
>SRA1000922	Arg	TCT
                   T      GTtt aattttcaaa
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     T - A
                     G - C          T T
                    T     T C T C C     A
      T A A        G      | | + | |     G
    G       T G T G       A G G G G     C
    G       + | | +                 T T
    A       G C A T
      T A          C     GGAT
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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