The detailed information of tRNA gene sequence


Sequence ID>SRA1000923
Genome IDSRR001049.152093
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttttgtcttt
tRNA gene sequence 
GCCCTCGTAGNTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGTCACAGGTTCGAA
TCCTGTCGAGGGTACAA
Downstream region at tRNA end position 
ttcaannnnn
Secondary structure (Cloverleaf model)
>SRA1000923	Arg	TCT
                   t      ACAA ttcaannnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T N G       A C A G G     C
    G       | |   |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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