The detailed information of tRNA gene sequence


Sequence ID>SRA1000925
Genome IDSRR001049.158263
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 106
End posion on genome 21
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCACTGTGGCGGAATTGGTATACGCAACGGACTTAAAATCCGTCGCCCTTTGGGATTGA
GGGTTCGAGTCCCTCCAGTGCTACCA
Downstream region at tRNA end position 
aataatgcgg
Secondary structure (Cloverleaf model)
>SRA1000925	Leu	TAA
                   n      ACCA aataatgcgg
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A T        A     CGCCCTTTGGGATT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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