The detailed information of tRNA gene sequence


Sequence ID>SRA1000934
Genome IDSRR001049.205268
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 80
End posion on genome 4
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aataagacaa
tRNA gene sequence 
GCACCAGTAGCTCAGTTGGATAGAGCATCGGTCTTCTAAACCGAGGGTCATAGGTTCGAG
TCCTATCTGGTGTGCCA
Downstream region at tRNA end position 
tatnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000934	Arg	TCT
                   a      GCCA tatnnnnnnn
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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