The detailed information of tRNA gene sequence


Sequence ID>SRA1000938
Genome IDSRR001049.215380
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 104
End posion on genome 19
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnnnnngc
tRNA gene sequence 
GGGCTCTTGGCGGAATTTGGTAGACGCGCTGGTTTTAGGCACCAGTATCTTATGATGTCC
GAGTTCGAGTCTCGGAGAGCCCATCA
Downstream region at tRNA end position 
ctttgctcct
Secondary structure (Cloverleaf model)
>SRA1000938	Leu	TAG
                   c      ATCA ctttgctcct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     G G C T C     A
    T T A A        G      | | | | |     G
  T         G G C G       C C G A G     C
  G           | | |                 T T
  G         A C G C
    T A G          G     TATCTTATGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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