The detailed information of tRNA gene sequence


Sequence ID>SRA1000946
Genome IDSRR001049.265329
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 106
End posion on genome 34
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGATCTGTAGCTCAACGGTAGTAGCAGGAGACTTTTAATCTCTTGGTTGCGGGTTCGAAT
CCCTCCAGATTCAatc
Downstream region at tRNA end position 
tcataacaac
Secondary structure (Cloverleaf model)
>SRA1000946	Lys	TTT
                   n      Aatc tcataacaac
                     G - C
                     G + T
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C A A        A      |   | | |     G
    G       C T C G       G C G G G     C
    G         | | |                 T T
    T       T A G C
      A G          A     TGGTT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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