The detailed information of tRNA gene sequence


Sequence ID>SRA1000947
Genome IDSRR001049.265572
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 96
End posion on genome 9
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agagtaaaga
tRNA gene sequence 
GGGACAGTGGTGGAATTTGGTAGACACAAGAGACTTAAAATCTCTCGCTCCATTGAGCAT
GCGGGTTCGAGTCCCGCCTGTCCTACCA
Downstream region at tRNA end position 
tctaaaaann
Secondary structure (Cloverleaf model)
>SRA1000947	Leu	TAA
                   a      ACCA tctaaaaann
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T G
                    T     C G C C C     A
    T T A A        G      | | | | |     G
  T         G G T G       G C G G G     C
  G           | | |                 T T
  G         A C A C
    T A G          A     CGCTCCATTGAGCAT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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