The detailed information of tRNA gene sequence


Sequence ID>SRA1000948
Genome IDSRR001049.270468
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 1
End posion on genome 76
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGNTATAGTTCAGTTGGGAGAACGTCTGCCTTGCACGCAGAAGGTCGTGGGTTCGAAT
CCCGCTACCTCCACCA
Downstream region at tRNA end position 
tttcaaggcc
Secondary structure (Cloverleaf model)
>SRA1000948	Ala	TGC
                   n      ACCA tttcaaggcc
                     G - C
                     G - C
                     G + T
                     G - C
                     N   C
                     T - A
                     A - T          T A
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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