The detailed information of tRNA gene sequence


Sequence ID>SRA1000955
Genome IDSRR001049.316504
Search identical group
Phylum/ClassLine Islands Corals, viral fraction from water of Palmyra (SRP000141)
Species
Start position on genome 108
End posion on genome 36
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tacattttat
tRNA gene sequence 
GCCCCTGTAGCTCAATTGGTAGAGCAACGGTTTTGTAAACCGTAGGTTGTAGGTTCAAGT
CCTATCAGTGGCTttc
Downstream region at tRNA end position 
ccaattaggg
Secondary structure (Cloverleaf model)
>SRA1000955	Thr	TGT
                   t      Tttc ccaattaggg
                     G - C
                     C - G
                     C - G
                     C   T
                     C - G
                     T - A
                     G - C          T G
                    T     T A T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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