The detailed information of tRNA gene sequence


Sequence ID>SRA1000965
Genome IDSRR001050.263453
Search identical group
Phylum/ClassLine Islands Corals microbial fraction from water of Fanning (SRP000142)
Species
Start position on genome 14
End posion on genome 85
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atatgtcgac
tRNA gene sequence 
NCCGCGATAGTATCGTGGTTAGTATTTCTTCCTGTCACGTAGAAGACCTGGGTTCAATTC
CCAGTCGCGGAAttt
Downstream region at tRNA end position 
tttcnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000965	Asp	GTC
                   c      Attt tttcnnnnnn
                     N   A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     G A C C C     A
      T G C        A      | | | | |     A
    G       T A T G       C T G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          T     AGAC
                    T - A
                    C - G
                    T - A
                    T   T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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