The detailed information of tRNA gene sequence


Sequence ID>SRA1000974
Genome IDSRR001051.34684
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 96
End posion on genome 19
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
aantaagtaa
tRNA gene sequence 
GCACCCATAGCTCAATTGGTAGAGCCGAGTACTCTAAATACTTGTGTTTGTTCTGGGTTC
GAGTCCCAGTGGGTGCGCtt
Downstream region at tRNA end position 
atataaacat
Secondary structure (Cloverleaf model)
>SRA1000974	Sup	CTA
                   a      GCtt atataaacat
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     GTGTTTGTT
                    G + T
                    A - T
                    G - C
                    T - A
                    A - T
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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