The detailed information of tRNA gene sequence


Sequence ID>SRA1000993
Genome IDSRR001051.90326
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 5
End posion on genome 81
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnncagt
tRNA gene sequence 
CCGAGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCAGGTTCAAA
TCCTGCCGCTCGGACCA
Downstream region at tRNA end position 
ttaactagga
Secondary structure (Cloverleaf model)
>SRA1000993	Pro	TGG
                   t      ACCA ttaactagga
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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