The detailed information of tRNA gene sequence


Sequence ID>SRA1001002
Genome IDSRR001051.137233
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 24
End posion on genome 98
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgtacttt
tRNA gene sequence 
GCTTCCTTAGCTCAGTTGGTTAGAGCACCCGTCTCATACACGGAGTGTCGTAGGTTCGAG
TCCTACAGGGAGCACtt
Downstream region at tRNA end position 
ccccccgatc
Secondary structure (Cloverleaf model)
>SRA1001002	Met	CAT
                   t      ACtt ccccccgatc
                     G - C
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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