The detailed information of tRNA gene sequence


Sequence ID>SRA1001005
Genome IDSRR001051.150746
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 30
End posion on genome 102
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taaccactat
tRNA gene sequence 
GCCGGTATAGCTCAGTTGGTAGAGCAGTTGATTTGTAATCATCAGGTCCCGTGTTCGAAT
CATGGTGCCGGCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001005	Thr	TGT
                   t      Gnnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G T A C     A
      T G A        A      | | + | |     G
    T       C T C G       C C G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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