The detailed information of tRNA gene sequence


Sequence ID>SRA1001008
Genome IDSRR001051.179382
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 88
End posion on genome 11
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaaatatcg
tRNA gene sequence 
GGAACATTAGCACAGTCAGGTTAGTGCGCTCGGCTCATAACCGAGTGGTCGTAGGTTCAA
ATCCTACCTGTTCCACTA
Downstream region at tRNA end position 
tcataacaaa
Secondary structure (Cloverleaf model)
>SRA1001008	Met	CAT
                   g      ACTA tcataacaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     A - T
                     T   C          T A
                    T     C A T C C     A
    C T G A        A      | | | | |     A
  A         C A C G       G T A G G     C
  G         | | | |                 T T
  G         G T G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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