The detailed information of tRNA gene sequence


Sequence ID>SRA1001009
Genome IDSRR001051.182692
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 8
End posion on genome 85
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnatattat
tRNA gene sequence 
AGCGGGATGGAGCAGTTTGGTCAGCTCGCAGGGCTCATAACCCTGAGGTCACAGGTTCGA
ATCCTGTTCCCGCAACTA
Downstream region at tRNA end position 
actgaaaatc
Secondary structure (Cloverleaf model)
>SRA1001009	Met	CAT
                   t      ACTA actgaaaatc
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
    T T G A        G      | | | | |     G
  T         C G A G       A C A G G     C
  G         | | | |                 T T
  G         G C T C
    T C A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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