The detailed information of tRNA gene sequence


Sequence ID>SRA1001017
Genome IDSRR001051.246494
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttttatatt
tRNA gene sequence 
GGACCTCTAGCTCAGTTGGTTAGAGCACACCGCTCATAACGGTTAGGTCCTCGGTTCGAG
TCCGAGGGGGTCCACCA
Downstream region at tRNA end position 
aataaggaga
Secondary structure (Cloverleaf model)
>SRA1001017	Met	CAT
                   t      ACCA aataaggaga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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