The detailed information of tRNA gene sequence


Sequence ID>SRA1001020
Genome IDSRR001051.291309
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 89
End posion on genome 12
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gaagagtaac
tRNA gene sequence 
GGGTCCGTGGGTTAGTTTGGCCTATACTTGGCGGCTGGGGGCCGTCAGACCCCAGTTCAA
ATCTGGGCGGACCCACCA
Downstream region at tRNA end position 
ttacacccat
Secondary structure (Cloverleaf model)
>SRA1001020	Pro	GGG
                   c      ACCA ttacacccat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
    T T G A        G      | | | | |     A
  T         T T G G       C C C A G     C
  G           | | +                 T T
  G         T A C T
    C C T A        T     AGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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