The detailed information of tRNA gene sequence


Sequence ID>SRA1001021
Genome IDSRR001051.292964
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 80
End posion on genome 4
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agggacacaa
tRNA gene sequence 
GGGGAGATAGCTCAATTGGTTAGAGCATCGGTCTCATAAACCGCAGGTTCCGAGTTCAAG
TCTCGGTCTCCCTACCA
Downstream region at tRNA end position 
tctnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001021	Met	CAT
                   a      ACCA tctnnnnnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     G G C T C     A
      T A A        A      | | | | |     A
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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