The detailed information of tRNA gene sequence


Sequence ID>SRA1001026
Genome IDSRR001051.318955
Search identical group
Phylum/ClassLine Islands Corals viral fraction from water of Fanning (SRP000143)
Species
Start position on genome 8
End posion on genome 93
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnaaaatac
tRNA gene sequence 
GCCGATGTGGTGGAATGGTAGACACGACGGATTCAAAATCCGTTGCCTGTAGGGGCGTGC
GAGTTCGAGTCTCGCCATCGGTACCA
Downstream region at tRNA end position 
agatgatccg
Secondary structure (Cloverleaf model)
>SRA1001026	Leu	CAA
                   c      ACCA agatgatccg
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    G       G G T G       G C G A G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCCTGTAGGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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