The detailed information of tRNA gene sequence


Sequence ID>W1911800134
Genome IDQYST01000020
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus Vp2 [QYST]
Start position on genome 182
End posion on genome 255
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatacatgga
tRNA gene sequence 
CGCGGGATGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAAtct
Downstream region at tRNA end position 
tttaagagga
Secondary structure (Cloverleaf model)
>W1911800134	Met	CAT
                   a      Atct tttaagagga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A   C          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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