The detailed information of tRNA gene sequence


Sequence ID>SRA1001082
Genome IDSRR001052.102580
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 82
End posion on genome 8
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaatattaat
tRNA gene sequence 
GGTGATATAGTTTAAAGGTAAAACAATTATTTCATATGTAATAAGATAAAGGTTCAAATC
CTTTTTTCACCTACA
Downstream region at tRNA end position 
agttaatnnn
Secondary structure (Cloverleaf model)
>SRA1001082	Met	CAT
                   t      TACA agttaatnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T   T
                     A - T          T A
                    T     T T T C C     A
        A A        A      | | | | |     A
      A     T T T G       A A A G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     AAGAT
                    A - T
                    T - A
                    T - A
                    A - T
                    T + G
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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