The detailed information of tRNA gene sequence


Sequence ID>SRA1001096
Genome IDSRR001052.122704
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 19
End posion on genome 89
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacctttag
tRNA gene sequence 
AGAAGATTAGGTTAGTGGTAGACCAAGGGCCTTCAAAGTTTTAAGCGTTTGTTCGATTCC
AGCATCTTCTGggt
Downstream region at tRNA end position 
tgggagtatg
Secondary structure (Cloverleaf model)
>SRA1001096	SeC	TCA
                   g      Gggt tgggagtatg
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + |   |     G
      T     T T G G       G T T T G     C
      G     + | | |                 T T
      G     G A C C
        T A        A     AAGC
                    A - T
                    G + T
                    G + T
                    G + T
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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