The detailed information of tRNA gene sequence


Sequence ID>SRA1001130
Genome IDSRR001052.195338
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 83
End posion on genome 10
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ngccagtatA
tRNA gene sequence 
TGCGTCATAGTATAATTGGTATTGCGCGAGTTTGCAAAGCTCTTAGTGCAGGTTCAAGTC
CTGTTGGCGCATTtg
Downstream region at tRNA end position 
attccaannn
Secondary structure (Cloverleaf model)
>SRA1001130	Cys	GCA
                   A      TTtg attccaannn
                     T - A
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       T A T G       G C A G G     C
    G         | + |                 T T
    G       T T G C
      T A          G     TAGT
                    C   T
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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