The detailed information of tRNA gene sequence


Sequence ID>SRA1001140
Genome IDSRR001052.211487
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 3
End posion on genome 74
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GTGTCTGTAACCTAATTGGGAAGGTGTCTGTTTTCGGAATAGGCAATAAGGGTTCGAGCC
CCTTTGGGCATTgng
Downstream region at tRNA end position 
ttttatgaan
Secondary structure (Cloverleaf model)
>SRA1001140	Arg	TCG
                   t      Tgng ttttatgaan
                     G + T
                     T - A
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          C G
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       T C C A       A A G G G     C
    G       | | | |                 T T
    G       A G G T
      G A          G     CAAT
                    T + G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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