The detailed information of tRNA gene sequence


Sequence ID>SRA1001183
Genome IDSRR001052.294314
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 29
End posion on genome 117
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acactcgcat
tRNA gene sequence 
GCTCGGGTGGTGGAATTGGTAGACACGACAGACTTAAAATCTGTTGAACCGAACGGTTCG
TGCGGGTTCGAGCCCCGCCCCGAGTACAA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001183	Leu	TAA
                   t      ACAA aannnnnnnn
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAACCGAACGGTTCGT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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