The detailed information of tRNA gene sequence


Sequence ID>SRA1001187
Genome IDSRR001052.308234
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 7
End posion on genome 83
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnngcttac
tRNA gene sequence 
GTCTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAG
TCCTACCTGGGACGCCT
Downstream region at tRNA end position 
tgcgggtgtg
Secondary structure (Cloverleaf model)
>SRA1001187	Arg	TCT
                   c      GCCT tgcgggtgtg
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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