The detailed information of tRNA gene sequence


Sequence ID>SRA1001189
Genome IDSRR001052.309093
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 8
End posion on genome 82
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nngaagaccA
tRNA gene sequence 
GCACCAGTAGCTCAGTGGTACGAGCGTGGGATTGCAGATCCTAAGGTCATGTGTTCGATC
CACATTTGGTGCTTaa
Downstream region at tRNA end position 
gtgtctcttt
Secondary structure (Cloverleaf model)
>SRA1001189	Cys	GCA
                   A      TTaa gtgtctcttt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     G + T          C T
                    T     T A C A C     A
      T G A        A      | | | | |     G
    G       C T C G       A T G T G     C
    G       | | | |                 T T
    T       G A G C
      A C          G     AGGTC
                    T - A
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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