The detailed information of tRNA gene sequence


Sequence ID>SRA1001203
Genome IDSRR001052.344116
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ntacaagtga
tRNA gene sequence 
CGGCGTGTAGTTCAATCTGGTAGAATGCATGGTTTGGGTTCATGTGGTTACAGGTTCAAA
TCCTGTCACGCCGACCA
Downstream region at tRNA end position 
tattccctcg
Secondary structure (Cloverleaf model)
>SRA1001203	Pro	TGG
                   a      ACCA tattccctcg
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T A A        A      | | | | |     A
    C       C T T G       A C A G G     C
    T       | | | +                 T T
    G       G A A T
      G T A        G     TGGTT
                    C - G
                    A - T
                    T - A
                    G - C
                    G + T
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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