The detailed information of tRNA gene sequence


Sequence ID>SRA1001216
Genome IDSRR001054.3829
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 21
End posion on genome 96
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gggaggccaA
tRNA gene sequence 
GCGTCATTGGTGTTTAACGGTTAGCATGTCAGATTTCCAATCTGAGGGTGACGGTTCGAA
TCCGTCATGGCGTTTta
Downstream region at tRNA end position 
tgaatttcag
Secondary structure (Cloverleaf model)
>SRA1001216	Gly	TCC
                   A      TTta tgaatttcag
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     A - T
                     T - A          T A
                    T     C T G C C     A
    A A T T        G      | | | | |     G
  C         T G T G       G A C G G     C
  G         + | | +                 T T
  G         G C A T
    T T A          G     GGGT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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