The detailed information of tRNA gene sequence


Sequence ID>SRA1001218
Genome IDSRR001054.7490
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 11
End posion on genome 84
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgaaataT
tRNA gene sequence 
ATGTCGGTGGTGTAACGGTAGCATATGCGTCTCCAAAGCGTTAAGGTCAGGGTTCAAATC
CTTGCCGACATGAat
Downstream region at tRNA end position 
aattacggac
Secondary structure (Cloverleaf model)
>SRA1001218	Trp	CCA
                   T      GAat aattacggac
                     A - T
                     T - A
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G T T C C     A
        A A        G      | | + | |     A
      C     T G T G       C A G G G     C
      G     + | | +                 T T
      G     G C A T
        T A        A     AAGGT
                    T   T
                    G + T
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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