The detailed information of tRNA gene sequence


Sequence ID>SRA1001219
Genome IDSRR001054.8594
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 113
End posion on genome 40
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcttttatct
tRNA gene sequence 
GCCCCCGTAGTTCAATTGGAAGAACAACACCCTTCTAAGGTGTAAGTTATAGGTTCGAAT
CCTGTCGGGGGTACat
Downstream region at tRNA end position 
agaatggtta
Secondary structure (Cloverleaf model)
>SRA1001219	Arg	TCT
                   t      ACat agaatggtta
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T A A        A      | + | | |     G
    T       C T T G       A T A G G     C
    G       | | | |                 T T
    G       G A A C
      A A          A     AAGTT
                    A - T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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