The detailed information of tRNA gene sequence


Sequence ID>SRA1001222
Genome IDSRR001054.39295
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 71
End posion on genome 1
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ggcgcaccat
tRNA gene sequence 
GCGGTCATGATGTAAGGGTAGCCTATCTCGTTGCCAACGAGAGTGTGAGAGTTCGATTCT
CTCTGACCGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001222	Gly	GCC
                   t      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T          T T
                    T     C T C T C     A
        A A        G      | | | | |     G
      G     T G T A       G A G A G     C
      G     + |   |                 T T
      G     G C C T
        T A        A     GTGT
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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